all_crystals.xyz
: This file contains the relaxed geometries and properties for 2'707 organic crystals. Each entry contains the following information: total energy from QE in Ryd (dft_energy_ryd
), binding energy (dft_cohesive_energy_relaxed_configs_ryd
), CCDC ID (CCDC_ID
), index in the file (crystal_idx
) and index of the corresponding molecules in the molecule file (mol_indices
). Each atom carries the corresponding information: position, atomic number (number
), index of the corresponding molecule (mol_indices
), index within the corresponding molecule (atom_index_in_mol
), and the index of the corrsponding unique molecule (unique_mol_index
).
all_relaxed_molecules.xyz
: This file contains the relaxed geometries and properties for 3'242 organic crystals. Each entry contains the following information: total energy from QE in Ryd (dft_energy_ryd
), index in the file (molecule_idx
) and index of the corresponding crystal in the crystal file (crystal_idx
).
all_relaxed_molecules_tagged.xyz
: This file contains the relaxed geometries and properties for 3'242 organic crystals. Each entry contains the following information: total energy from QE in Ryd (dft_energy_ryd
), index in the file (molecule_idx
) and index of the corresponding crystal in the crystal file (crystal_idx
). This file also contains in the info
the entries motif_indices
and motif_names
, which tell which atoms belong to which motifs, as determined by SMARTS pattern matching.
chemiscopes/
: Chemiscope files uploaded to molmotifs.matcloud.xyz.
pseudo/
: pseudopotentials used for all DFT-PBE-D2 calculations